Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate--trna(asp/asn) ligase | ASC92_24190 | Not Available | Negative | 1593725 - 1595530 | 67243.0 |
| hypothetical protein | ASC92_24195 | Not Available | Negative | 1595568 - 1596200 | 22758.1 |
| fmdb family transcriptional regulator | ASC92_24200 | Not Available | Negative | 1596216 - 1596545 | 10644.3 |
| spermidine/putrescine abc transporter permease | ASC92_24205 | Not Available | Negative | 1596613 - 1597455 | 30317.7 |
| spermidine/putrescine abc transporter permease | ASC92_24210 | Not Available | Negative | 1597452 - 1598399 | 35073.8 |
| transporter | ASC92_24215 | Not Available | Negative | 1598414 - 1599514 | 40016.4 |
| spermidine/putrescine abc transporter substrate-binding protein | ASC92_24220 | Not Available | Negative | 1599536 - 1600663 | 40744.2 |
| ubiquinone biosynthesis protein ubib | ASC92_24225 | Not Available | Negative | 1600711 - 1602276 | 59845.5 |
| hypothetical protein | ASC92_24230 | Not Available | Negative | 1602273 - 1602830 | 20443.4 |
| preprotein translocase subunit tim44 | ASC92_24235 | Not Available | Negative | 1602885 - 1603916 | 34728.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
