Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_23990 | Not Available | Negative | 1561165 - 1561863 | 25669.1 |
| isocitrate dehydrogenase | ASC92_23995 | Not Available | Negative | 1561889 - 1562923 | 36403.2 |
| methionine--trna ligase | ASC92_24000 | Not Available | Positive | 1563044 - 1565137 | 76713.3 |
| hypothetical protein | ASC92_24005 | Not Available | Positive | 1565137 - 1565361 | 6984.61 |
| sulfate transporter | ASC92_24010 | Not Available | Positive | 1565414 - 1567093 | 59126.8 |
| hypothetical protein | ASC92_24015 | Not Available | Negative | 1567097 - 1567570 | 17397.8 |
| acetyl-coa carboxyl transferase | ASC92_24020 | Not Available | Positive | 1567640 - 1567846 | 8144.68 |
| segregation and condensation protein a | ASC92_24025 | Not Available | Positive | 1567922 - 1568758 | 31887.0 |
| l-aspartate oxidase | ASC92_24030 | Not Available | Positive | 1568779 - 1570362 | 56902.8 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | ASC92_24035 | Not Available | Positive | 1570437 - 1571333 | 31199.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
