Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | ASC92_23890 | Not Available | Negative | 1539289 - 1541805 | 89085.7 |
| hypothetical protein | ASC92_23895 | Not Available | Positive | 1542009 - 1542236 | 7093.52 |
| selenide, water dikinase | ASC92_23900 | Not Available | Negative | 1542320 - 1543372 | 36113.9 |
| phosphonate abc transporter substrate-binding protein | ASC92_23905 | Not Available | Positive | 1543471 - 1544331 | 30660.8 |
| phosphonate abc transporter | ASC92_23910 | Not Available | Positive | 1544372 - 1545187 | 28224.3 |
| abc transporter permease | ASC92_23915 | Not Available | Positive | 1545184 - 1546014 | 28898.1 |
| phosphonate abc transporter permease | ASC92_23920 | Not Available | Positive | 1546011 - 1546811 | 28296.1 |
| trna 2-selenouridine synthase | ASC92_23925 | Not Available | Positive | 1547110 - 1548180 | 39204.0 |
| formate dehydrogenase family accessory protein fdhd | ASC92_23930 | Not Available | Negative | 1548114 - 1548971 | 30064.2 |
| hypothetical protein | ASC92_23935 | Not Available | Negative | 1549063 - 1549353 | 10318.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
