Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase | ASC92_23840 | Not Available | Positive | 1529844 - 1530872 | 37977.3 |
| cytochrome o ubiquinol oxidase subunit i | ASC92_23845 | Not Available | Positive | 1530874 - 1532877 | 74606.8 |
| cytochrome o ubiquinol oxidase subunit iii | ASC92_23850 | Not Available | Positive | 1532870 - 1533532 | 24171.7 |
| cytochrome c oxidase subunit iii | ASC92_23855 | Not Available | Positive | 1533529 - 1533939 | 14953.5 |
| hypothetical protein | ASC92_23860 | Not Available | Positive | 1533939 - 1534733 | 28741.0 |
| histidine kinase | ASC92_23865 | Not Available | Positive | 1534717 - 1536114 | 50696.6 |
| two-component system response regulator | ASC92_23870 | Not Available | Positive | 1536095 - 1536640 | 19643.6 |
| hemolysin d | ASC92_23875 | Not Available | Positive | 1536678 - 1537364 | 24414.2 |
| slyx protein | ASC92_23880 | Not Available | Negative | 1537371 - 1537595 | 8669.05 |
| hypothetical protein | ASC92_23885 | Not Available | Negative | 1537694 - 1539199 | 54864.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
