Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_23785 | Not Available | Negative | 1516373 - 1517329 | 35304.2 |
| hypothetical protein | ASC92_23790 | Not Available | Negative | 1517531 - 1518493 | 35234.0 |
| hypothetical protein | ASC92_23795 | Not Available | Negative | 1518532 - 1520397 | 67667.2 |
| amino acid abc transporter substrate-binding protein | ASC92_23805 | Not Available | Positive | 1523378 - 1524205 | 29605.7 |
| abc transporter permease | ASC92_23810 | Not Available | Positive | 1524373 - 1525068 | 25605.8 |
| amino acid abc transporter permease | ASC92_23815 | Not Available | Positive | 1525082 - 1525792 | 26172.0 |
| amino acid abc transporter atp-binding protein | ASC92_23820 | Not Available | Positive | 1525789 - 1526532 | 27699.5 |
| iron oxidase | ASC92_23825 | Not Available | Positive | 1526549 - 1527562 | 37062.3 |
| had family hydrolase | ASC92_23830 | Not Available | Negative | 1527573 - 1528262 | 24619.6 |
| arabinose abc transporter permease | ASC92_23835 | Not Available | Negative | 1528325 - 1529665 | 47408.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
