Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ASC92_00660 | Not Available | Negative | 154840 - 155799 | 35326.6 |
| aldehyde dehydrogenase | ASC92_00665 | Not Available | Positive | 155948 - 157402 | 51673.7 |
| laci family transcriptional regulator | ASC92_00670 | Not Available | Positive | 157453 - 158418 | 34904.4 |
| sugar abc transporter substrate-binding protein | ASC92_00675 | Not Available | Positive | 158430 - 159500 | 38602.5 |
| abc transporter atp-binding protein | ASC92_00680 | Not Available | Positive | 159527 - 161053 | 55315.5 |
| abc transporter permease | ASC92_00685 | Not Available | Positive | 161040 - 162251 | 42597.6 |
| sugar abc transporter atp-binding protein | ASC92_00690 | Not Available | Positive | 162258 - 163778 | 54598.4 |
| sugar abc transporter permease | ASC92_00695 | Not Available | Positive | 163959 - 165014 | 36742.2 |
| abc transporter permease | ASC92_00700 | Not Available | Positive | 165011 - 166039 | 36172.2 |
| dihydroxy-acid dehydratase | ASC92_00705 | Not Available | Positive | 166044 - 167780 | 61915.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
