Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | ASC92_23685 | Not Available | Negative | 1497402 - 1498418 | 36909.2 |
| acyl-coa synthetase | ASC92_23690 | Not Available | Negative | 1498459 - 1500048 | 57251.7 |
| acetyl-coa acetyltransferase | ASC92_23695 | Not Available | Negative | 1500045 - 1501214 | 41275.0 |
| 3-oxoacyl-acp reductase | ASC92_23700 | Not Available | Negative | 1501211 - 1502029 | 28030.7 |
| lysr family transcriptional regulator | ASC92_23705 | Not Available | Positive | 1502235 - 1503137 | 32819.1 |
| transposase | ASC92_23710 | Not Available | Positive | 1503125 - 1503985 | 31686.7 |
| hypothetical protein | ASC92_23715 | Not Available | Positive | 1504359 - 1505585 | 42294.0 |
| hypothetical protein | ASC92_23720 | Not Available | Negative | 1505943 - 1506197 | 9311.13 |
| Trna-ser | Not Available | Not Available | Positive | 1506372 - 1506461 | Not Available |
| serine--trna ligase | ASC92_23730 | Not Available | Negative | 1506519 - 1507850 | 48337.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
