Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconate dehydrogenase | ASC92_23625 | Not Available | Positive | 1478819 - 1479721 | 30815.1 |
| hypothetical protein | ASC92_23630 | Not Available | Positive | 1479771 - 1480109 | 12856.5 |
| glucoamylase | ASC92_23635 | Not Available | Negative | 1480075 - 1481946 | 69323.1 |
| hypothetical protein | ASC92_23640 | Not Available | Negative | 1482083 - 1482328 | 9303.01 |
| phosphopantetheinyl transferase | ASC92_23645 | Not Available | Positive | 1482572 - 1483354 | 29696.3 |
| hypothetical protein | ASC92_23655 | Not Available | Negative | 1487746 - 1488012 | 9174.47 |
| hypothetical protein | ASC92_23660 | Not Available | Negative | 1488113 - 1488370 | 8703.33 |
| flagellar motor protein motb | ASC92_23670 | Not Available | Positive | 1492791 - 1493702 | 32860.3 |
| hypothetical protein | ASC92_23675 | Not Available | Positive | 1493796 - 1495514 | 60746.1 |
| abc transporter permease | ASC92_23680 | Not Available | Negative | 1495525 - 1497405 | 65131.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
