Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan--trna ligase | ASC92_23460 | Not Available | Positive | 1443700 - 1445031 | 48156.5 |
| luxr family transcriptional regulator | ASC92_23465 | Not Available | Positive | 1445105 - 1445707 | 21819.4 |
| histidine kinase | ASC92_23470 | Not Available | Negative | 1445844 - 1447259 | 52083.4 |
| hypothetical protein | ASC92_23475 | Not Available | Positive | 1447429 - 1447830 | 14290.2 |
| sugar abc transporter permease | ASC92_23480 | Not Available | Negative | 1447857 - 1448681 | 29784.7 |
| abc transporter permease | ASC92_23485 | Not Available | Negative | 1448678 - 1449553 | 31848.0 |
| abc transporter | ASC92_23495 | Not Available | Negative | 1450937 - 1452031 | 39086.5 |
| cytochrome b | ASC92_23500 | Not Available | Negative | 1452068 - 1452685 | 22467.7 |
| sugar abc transporter substrate-binding protein | ASC92_23505 | Not Available | Negative | 1452776 - 1453888 | 38810.2 |
| abc transporter permease | ASC92_23510 | Not Available | Negative | 1453885 - 1454982 | 38233.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
