Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_23255 | Not Available | Positive | 1398563 - 1399195 | 22576.7 |
| hydrolase nlp/p60 | ASC92_23260 | Not Available | Negative | 1399200 - 1399730 | 18323.1 |
| dna-binding protein hu | ASC92_23265 | Not Available | Negative | 1399854 - 1400144 | 9844.68 |
| sam-dependent methyltransferase | ASC92_23270 | Not Available | Negative | 1400325 - 1400951 | 22711.2 |
| methionine aminopeptidase | ASC92_23275 | Not Available | Positive | 1401112 - 1401858 | 26658.9 |
| glutathione s-transferase | ASC92_23280 | Not Available | Positive | 1402036 - 1402689 | 23819.7 |
| acetyltransferase | ASC92_23285 | Not Available | Positive | 1402791 - 1403288 | 18193.9 |
| hypothetical protein | ASC92_23290 | Not Available | Positive | 1403421 - 1404083 | 25010.9 |
| lysr family transcriptional regulator | ASC92_23295 | Not Available | Negative | 1404318 - 1405253 | 34125.1 |
| multidrug abc transporter | ASC92_23300 | Not Available | Positive | 1405393 - 1406826 | 48954.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
