Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose epimerase | ASC92_00605 | Not Available | Positive | 144157 - 145275 | 40461.4 |
| hypothetical protein | ASC92_00610 | Not Available | Negative | 145657 - 145968 | 11075.2 |
| 2-oxoisovalerate dehydrogenase | ASC92_00615 | Not Available | Positive | 146207 - 147448 | 45123.5 |
| 2-oxoisovalerate dehydrogenase | ASC92_00620 | Not Available | Positive | 147454 - 148467 | 36858.0 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | ASC92_00625 | Not Available | Positive | 148468 - 149646 | 41432.0 |
| cupin 2 conserved barrel domain protein | ASC92_00630 | Not Available | Positive | 149703 - 150065 | 12630.5 |
| hypothetical protein | ASC92_00635 | Not Available | Negative | 150203 - 150778 | 20991.2 |
| murein transglycosylase | ASC92_00645 | Not Available | Positive | 151430 - 152743 | 46484.0 |
| gluconolactonase | ASC92_00650 | Not Available | Negative | 152896 - 153825 | 33999.6 |
| 3-oxoacyl-acp reductase | ASC92_00655 | Not Available | Positive | 153958 - 154731 | 27583.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
