Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cmp deaminase | ASC92_23150 | Not Available | Positive | 1374983 - 1375510 | 19037.3 |
| urease accessory protein ured | ASC92_23155 | Not Available | Positive | 1375647 - 1376477 | 30347.5 |
| hypothetical protein | ASC92_23160 | Not Available | Positive | 1376583 - 1377485 | 33493.8 |
| sam-dependent methyltransferase | ASC92_23165 | Not Available | Positive | 1377482 - 1378426 | 33481.3 |
| hypothetical protein | ASC92_23170 | Not Available | Positive | 1378423 - 1379520 | 39554.0 |
| ornithine-acyl-acp acyltransferase | ASC92_23175 | Not Available | Positive | 1379538 - 1380359 | 29850.8 |
| diguanylate cyclase | ASC92_23180 | Not Available | Positive | 1380463 - 1382007 | 55072.7 |
| lysr family transcriptional regulator | ASC92_23185 | Not Available | Negative | 1382035 - 1382907 | 31897.8 |
| hypothetical protein | ASC92_23190 | Not Available | Positive | 1383015 - 1383605 | 21482.6 |
| sulfurtransferase | ASC92_23195 | Not Available | Positive | 1383688 - 1385271 | 56620.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
