Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_22895 | Not Available | Negative | 1317722 - 1318273 | 20617.3 |
| glyoxalase | ASC92_22900 | Not Available | Negative | 1318270 - 1318650 | 13436.1 |
| oxidoreductase | ASC92_22905 | Not Available | Negative | 1318647 - 1319411 | 26615.1 |
| 6-carboxyhexanoate--coa ligase | ASC92_22910 | Not Available | Negative | 1319408 - 1321540 | 73025.4 |
| enoyl-coa hydratase | ASC92_22915 | Not Available | Negative | 1321544 - 1322305 | 27863.7 |
| acyl-coa dehydrogenase | ASC92_22920 | Not Available | Negative | 1322302 - 1323432 | 39823.9 |
| acyl-coa dehydrogenase | ASC92_22925 | Not Available | Negative | 1323442 - 1324635 | 43665.1 |
| flavin reductase | ASC92_22930 | Not Available | Negative | 1324691 - 1325656 | 34581.6 |
| hypothetical protein | ASC92_22935 | Not Available | Negative | 1325694 - 1326785 | 40537.7 |
| lysr family transcriptional regulator | ASC92_22940 | Not Available | Positive | 1326885 - 1327796 | 33826.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
