Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s26 family signal peptidase | ASC92_06105 | Not Available | Positive | 1306132 - 1306641 | 17703.7 |
| conjugal transfer protein | ASC92_06110 | Not Available | Positive | 1307131 - 1309107 | 72570.9 |
| hypothetical protein | ASC92_06115 | Not Available | Negative | 1309308 - 1310159 | 31222.8 |
| hypothetical protein | ASC92_06120 | Not Available | Positive | 1310446 - 1311198 | 26458.8 |
| hypothetical protein | ASC92_06125 | Not Available | Positive | 1311363 - 1311770 | 14575.5 |
| isocitrate lyase | ASC92_06130 | Not Available | Positive | 1311767 - 1312114 | 12745.5 |
| transposase | ASC92_06135 | Not Available | Positive | 1312185 - 1313807 | 59402.9 |
| hypothetical protein | ASC92_06140 | Not Available | Positive | 1313836 - 1314354 | 19589.6 |
| alpha-ketoglutarate permease | ASC92_22885 | Not Available | Positive | 1315201 - 1316550 | 48303.5 |
| acyl-coa dehydrogenase | ASC92_22890 | Not Available | Negative | 1316559 - 1317725 | 41845.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
