Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_06000 | Not Available | Positive | 1287877 - 1289403 | 55142.5 |
| hypothetical protein | ASC92_06005 | Not Available | Positive | 1289437 - 1290174 | 26690.5 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | ASC92_06010 | Not Available | Positive | 1290224 - 1291081 | 30812.6 |
| hypothetical protein | ASC92_06015 | Not Available | Negative | 1291391 - 1292203 | 29402.0 |
| hypothetical protein | ASC92_06020 | Not Available | Positive | 1292748 - 1293575 | 30771.6 |
| chromosome partitioning protein parb | ASC92_06025 | Not Available | Positive | 1293663 - 1295726 | 73635.0 |
| hypothetical protein | ASC92_06030 | Not Available | Positive | 1296426 - 1296734 | 10888.8 |
| hypothetical protein | ASC92_06035 | Not Available | Positive | 1297332 - 1297556 | 8203.73 |
| integrase | ASC92_06040 | Not Available | Negative | 1297607 - 1298608 | 37108.9 |
| hypothetical protein | ASC92_06045 | Not Available | Negative | 1298605 - 1299513 | 33531.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
