Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | ASC92_05950 | Not Available | Negative | 1278650 - 1279432 | 28148.0 |
| hypothetical protein | ASC92_05955 | Not Available | Negative | 1279442 - 1280173 | 25994.8 |
| hypothetical protein | ASC92_05960 | Not Available | Negative | 1280185 - 1281021 | 30540.7 |
| hypothetical protein | ASC92_05965 | Not Available | Negative | 1281018 - 1281797 | 27827.3 |
| hypothetical protein | ASC92_05970 | Not Available | Negative | 1281799 - 1282812 | 36037.8 |
| biphenyl 2,3-dioxygenase | ASC92_05975 | Not Available | Negative | 1282846 - 1283400 | 20734.4 |
| hypothetical protein | ASC92_05980 | Not Available | Negative | 1283397 - 1285157 | 63961.6 |
| hypothetical protein | ASC92_05985 | Not Available | Positive | 1285261 - 1285908 | 23968.8 |
| abc transporter substrate-binding protein | ASC92_05990 | Not Available | Negative | 1286162 - 1287184 | 35747.2 |
| glyoxalase | ASC92_05995 | Not Available | Positive | 1287300 - 1287857 | 21274.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
