Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | ASC92_05900 | Not Available | Negative | 1269367 - 1270107 | 26628.4 |
| hypothetical protein | ASC92_05905 | Not Available | Negative | 1270104 - 1271111 | 34556.3 |
| abc transporter permease | ASC92_05910 | Not Available | Negative | 1271108 - 1271965 | 30014.8 |
| amino acid-binding protein | ASC92_05915 | Not Available | Negative | 1272002 - 1273180 | 42165.3 |
| luxr family transcriptional regulator | ASC92_05920 | Not Available | Positive | 1273363 - 1274169 | 29758.1 |
| lysr family transcriptional regulator | ASC92_05925 | Not Available | Positive | 1274262 - 1275299 | 39203.7 |
| abc transporter substrate-binding protein | ASC92_05930 | Not Available | Positive | 1275334 - 1276314 | 34893.5 |
| hypothetical protein | ASC92_05935 | Not Available | Positive | 1276603 - 1276851 | 8476.68 |
| hypothetical protein | ASC92_05940 | Not Available | Negative | 1277274 - 1278251 | 34453.8 |
| hypothetical protein | ASC92_05945 | Not Available | Negative | 1278267 - 1278653 | 14381.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
