Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_05845 | Not Available | Negative | 1260477 - 1261322 | 30826.2 |
| rna polymerase subunit sigma-24 | ASC92_05850 | Not Available | Negative | 1261322 - 1261840 | 19562.7 |
| tetr family transcriptional regulator | ASC92_05860 | Not Available | Positive | 1262727 - 1263305 | 21241.6 |
| hypothetical protein | ASC92_05865 | Not Available | Positive | 1263387 - 1264154 | 28103.6 |
| ester cyclase | ASC92_05870 | Not Available | Positive | 1264199 - 1264609 | 15675.8 |
| hypothetical protein | ASC92_05875 | Not Available | Negative | 1264678 - 1265187 | 18780.7 |
| aldehyde dismutase | ASC92_05880 | Not Available | Negative | 1265317 - 1266513 | 41680.2 |
| 2fe-2s ferredoxin | ASC92_05885 | Not Available | Negative | 1266537 - 1267634 | 41249.8 |
| vanillate o-demethylase oxidoreductase | ASC92_05890 | Not Available | Negative | 1267665 - 1268621 | 34105.5 |
| abc transporter atp-binding protein | ASC92_05895 | Not Available | Negative | 1268652 - 1269365 | 25759.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
