Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | ASC92_05795 | Not Available | Negative | 1248420 - 1249130 | 24862.6 |
| abc transporter atp-binding protein | ASC92_05800 | Not Available | Negative | 1249127 - 1249885 | 26831.6 |
| branched-chain amino acid abc transporter permease | ASC92_05805 | Not Available | Negative | 1249887 - 1250831 | 32451.2 |
| abc transporter permease | ASC92_05810 | Not Available | Negative | 1250828 - 1251700 | 29297.0 |
| alpha-hydroxy-acid oxidizing enzyme | ASC92_05815 | Not Available | Negative | 1251693 - 1252886 | 42579.1 |
| abc transporter substrate-binding protein | ASC92_05820 | Not Available | Negative | 1252913 - 1254085 | 41704.5 |
| indolepyruvate oxidoreductase subunit b | ASC92_05825 | Not Available | Negative | 1254126 - 1255700 | 56225.8 |
| indolepyruvate ferredoxin oxidoreductase | ASC92_05830 | Not Available | Negative | 1255697 - 1257859 | 76831.4 |
| hypothetical protein | ASC92_05835 | Not Available | Positive | 1258466 - 1258855 | 13865.9 |
| hypothetical protein | ASC92_05840 | Not Available | Positive | 1258914 - 1260308 | 49059.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
