Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_05485 | Not Available | Positive | 1173219 - 1173563 | 12539.9 |
| hypothetical protein | ASC92_05490 | Not Available | Positive | 1173794 - 1174549 | 26149.7 |
| hypothetical protein | ASC92_05495 | Not Available | Positive | 1174597 - 1176207 | 57511.5 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | ASC92_05500 | Not Available | Positive | 1176249 - 1177106 | 30916.9 |
| hypothetical protein | ASC92_05505 | Not Available | Positive | 1177134 - 1178105 | 33543.7 |
| hypothetical protein | ASC92_05510 | Not Available | Positive | 1178139 - 1179113 | 34506.1 |
| nadph-dependent fmn reductase | ASC92_05515 | Not Available | Positive | 1179149 - 1179718 | 20667.1 |
| hypothetical protein | ASC92_05520 | Not Available | Positive | 1180092 - 1181351 | 44985.0 |
| transcriptional regulator | ASC92_05525 | Not Available | Negative | 1182216 - 1182833 | 23172.0 |
| nadh-ubiquinone oxidoreductase subunit 3 | ASC92_05530 | Not Available | Positive | 1182888 - 1183616 | 26526.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
