Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | ASC92_05430 | Not Available | Positive | 1163517 - 1164593 | 39951.3 |
| phenylalanine--trna ligase subunit beta | ASC92_05435 | Not Available | Positive | 1164635 - 1167076 | 88098.2 |
| integration host factor subunit alpha | ASC92_05440 | Not Available | Positive | 1167082 - 1167453 | 13400.9 |
| merr family transcriptional regulator | ASC92_05445 | Not Available | Positive | 1167518 - 1167976 | 17768.5 |
| Trna-pro | Not Available | Not Available | Positive | 1168003 - 1168079 | Not Available |
| integrase | ASC92_05455 | Not Available | Positive | 1168272 - 1169522 | 46293.9 |
| transcriptional regulator | ASC92_05460 | Not Available | Negative | 1169573 - 1169788 | 8257.23 |
| hypothetical protein | ASC92_05470 | Not Available | Negative | 1170962 - 1171627 | 25098.9 |
| 3-(2,3-dihydroxyphenyl)propionate dioxygenase | ASC92_05475 | Not Available | Positive | 1171766 - 1172707 | 33996.4 |
| hypothetical protein | ASC92_05480 | Not Available | Positive | 1172709 - 1173146 | 16427.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
