Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | ASC92_05380 | Not Available | Negative | 1154289 - 1155254 | 33537.5 |
| tetr family transcriptional regulator | ASC92_05385 | Not Available | Negative | 1155398 - 1156054 | 24998.9 |
| hypothetical protein | ASC92_05390 | Not Available | Negative | 1156192 - 1156635 | 15171.0 |
| hypothetical protein | ASC92_05395 | Not Available | Negative | 1156792 - 1157715 | 32396.7 |
| gamma-glutamyl cyclotransferase | ASC92_05400 | Not Available | Positive | 1157757 - 1158167 | 14998.9 |
| isocitrate lyase | ASC92_05405 | Not Available | Positive | 1158373 - 1159704 | 48747.4 |
| threonine--trna ligase | ASC92_05410 | Not Available | Positive | 1160030 - 1161937 | 72408.5 |
| translation initiation factor if-3 | ASC92_05415 | Not Available | Positive | 1162114 - 1162662 | 19992.5 |
| 50s ribosomal protein l35 | ASC92_05420 | Not Available | Positive | 1162817 - 1163020 | 7482.51 |
| 50s ribosomal protein l20 | ASC92_05425 | Not Available | Positive | 1163045 - 1163404 | 13406.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
