Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitermination regulator | ASC92_04980 | Not Available | Positive | 1071785 - 1073062 | 44950.2 |
| nitrate abc transporter atp-binding protein | ASC92_04985 | Not Available | Negative | 1073178 - 1073987 | 29156.6 |
| nitrate abc transporter permease | ASC92_04990 | Not Available | Negative | 1073984 - 1074748 | 27588.6 |
| nitrate transporter | ASC92_04995 | Not Available | Negative | 1074943 - 1076187 | 45654.1 |
| antitermination regulator | ASC92_05000 | Not Available | Negative | 1076533 - 1077801 | 46929.4 |
| trna threonylcarbamoyl adenosine modification protein tsad | ASC92_05005 | Not Available | Positive | 1077906 - 1078967 | 37001.9 |
| esterase | ASC92_05010 | Not Available | Negative | 1078903 - 1079658 | 27828.2 |
| heat-shock protein hsp20 | ASC92_05015 | Not Available | Negative | 1079849 - 1080220 | 13617.2 |
| abc transporter permease | ASC92_05020 | Not Available | Positive | 1080345 - 1081625 | 46610.8 |
| aspartate aminotransferase | ASC92_05025 | Not Available | Positive | 1081656 - 1082828 | 42569.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
