Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trehalose-6-phosphate synthase | ASC92_00450 | Not Available | Negative | 102681 - 104066 | 52475.7 |
| glucoamylase | ASC92_00455 | Not Available | Negative | 104063 - 105985 | 71241.5 |
| trehalose phosphatase | ASC92_00460 | Not Available | Negative | 105982 - 106773 | 28424.4 |
| phosphatase | ASC92_00465 | Not Available | Negative | 106902 - 108065 | 42243.8 |
| hypothetical protein | ASC92_00470 | Not Available | Positive | 108231 - 108956 | 25495.4 |
| glutathione s-transferase | ASC92_00475 | Not Available | Negative | 108979 - 109665 | 25491.8 |
| lytic transglycosylase | ASC92_00480 | Not Available | Negative | 110065 - 112098 | 74700.7 |
| 5-formyltetrahydrofolate cyclo-ligase | ASC92_00485 | Not Available | Positive | 112108 - 112725 | 23169.9 |
| lysr family transcriptional regulator | ASC92_00490 | Not Available | Negative | 112735 - 113718 | 36626.8 |
| hypothetical protein | ASC92_00495 | Not Available | Positive | 113892 - 114209 | 11071.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
