Streptomyces sp. Root369

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces sp. Root369 is a filamentous bacterium notable for its possession of flagella, which enables motility. This characteristic is significant in navigating its environment, potentially aiding in nutrient acquisition and interaction with other microorganisms. The organism is characterized by having a single replicon, indicating a unique chromosomal structure that can impact its genetic stability and replication processes. The accession number for Streptomyces sp. Root369 is LMDL00000000.1, which provides a reference point for genetic and taxonomic studies related to this strain. The presence of flagella suggests that Streptomyces sp. Root369 may exhibit behaviors related to chemotaxis, which could influence its ecological role within its habitat. In terms of biological and ecological insight, the motility afforded by flagella can play a crucial role in the survival and adaptability of Streptomyces sp. Root369 in various environments, particularly in soil ecosystems where competition for resources is prevalent. This motility allows for a dynamic response to environmental changes, facilitating the exploration of diverse niches and contributing to the complex interactions within microbial communities. The ability to move toward or away from specific stimuli could enhance its survival and competitiveness, highlighting the importance of flagellar function in the ecological success of this bacterium.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. Root369
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces sp. Root369
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces sp. Root369 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1596390 bp

Thymine Count

1592348 bp

Guanine Count

3768583 bp

Cytosine Count

3783018 bp

Genome Length

10741251 bp

Protein-coding Genes

9212 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinASD08_35605Not AvailableNegative4463545 - 446401516302.6
Minor tail proteinASD08_35610Not AvailableNegative4464016 - 446505636622.8
Minor tail proteinASD08_35615Not AvailableNegative4465948 - 446726146404.6
Hypothetical proteinASD08_35620Not AvailableNegative4467261 - 4471706149370.0
hypothetical proteinASD08_35625Not AvailableNegative4471773 - 44720008564.24
Hypothetical proteinASD08_35630Not AvailableNegative4471997 - 447255420179.7
hypothetical proteinASD08_35635Not AvailablePositive4472830 - 447342622171.0
Head-to-tail connectorASD08_35640Not AvailableNegative4473459 - 447383614030.2
Hypothetical proteinASD08_35645Not AvailableNegative4473833 - 447441720240.2
Hypothetical proteinASD08_35650Not AvailablePositive4474702 - 447514816327.5

Displaying genes 11 – 20 of 9309 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

538 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 538 metabolites

Health Effects

No health effects information available for this bacterium.