Pseudomonas sp. Root329

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. Root329 is characterized by having a single replicon. This trait suggests a streamlined genetic organization, which may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession LMCV00000000.1, indicating that it has been sequenced and is available for study in genomic databases. As a member of the Pseudomonas genus, Root329 is likely to exhibit traits commonly associated with this group, such as metabolic versatility and the ability to thrive in diverse habitats. Pseudomonas species are known for their roles in bioremediation, plant growth promotion, and their interactions with various ecosystems. The significant ecological role of Pseudomonas species in nutrient cycling and as plant-associated bacteria highlights the potential of Pseudomonas sp. Root329 in agricultural contexts. Understanding the specific characteristics of Pseudomonas sp. Root329, particularly its genetic makeup and ecological interactions, can provide insights into its potential applications in agriculture and environmental management. Its single replicon may facilitate certain metabolic pathways, enabling it to adapt to specific environmental stresses or nutrient conditions. Therefore, further research on Pseudomonas sp. Root329 could unveil its potential benefits in sustainable agricultural practices or bioremediation efforts, emphasizing the importance of studying microbial diversity for ecological and agricultural advancements.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. Root329
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. Root329
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. Root329 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1365907 bp

Thymine Count

1386618 bp

Guanine Count

2008014 bp

Cytosine Count

1972593 bp

Genome Length

6733554 bp

Protein-coding Genes

5927 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
porphobilinogen deaminaseASC74_01645Not AvailablePositive355976 - 35691733661.4
uroporphyrinogen-iii synthaseASC74_01650Not AvailablePositive356914 - 35768127853.7
heme biosynthesis operon protein hemxASC74_01655Not AvailablePositive357698 - 35885241817.7
heme biosynthesis protein hemyASC74_01660Not AvailablePositive358849 - 36008746273.4
disulfide bond formation protein bASC74_01665Not AvailablePositive360317 - 36086820185.1
transcriptional regulatorASC74_01670Not AvailablePositive361048 - 36150617215.4
peptidylprolyl isomeraseASC74_01675Not AvailableNegative361570 - 36223523976.6
hypothetical proteinASC74_01680Not AvailableNegative362467 - 3627128973.17
hypothetical proteinASC74_01685Not AvailableNegative363209 - 36350511952.1
hypothetical proteinASC74_01690Not AvailableNegative363537 - 36400117020.3

Displaying genes 411 – 420 of 6058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.