Pseudomonas sp. Root329

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. Root329 is characterized by having a single replicon. This trait suggests a streamlined genetic organization, which may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession LMCV00000000.1, indicating that it has been sequenced and is available for study in genomic databases. As a member of the Pseudomonas genus, Root329 is likely to exhibit traits commonly associated with this group, such as metabolic versatility and the ability to thrive in diverse habitats. Pseudomonas species are known for their roles in bioremediation, plant growth promotion, and their interactions with various ecosystems. The significant ecological role of Pseudomonas species in nutrient cycling and as plant-associated bacteria highlights the potential of Pseudomonas sp. Root329 in agricultural contexts. Understanding the specific characteristics of Pseudomonas sp. Root329, particularly its genetic makeup and ecological interactions, can provide insights into its potential applications in agriculture and environmental management. Its single replicon may facilitate certain metabolic pathways, enabling it to adapt to specific environmental stresses or nutrient conditions. Therefore, further research on Pseudomonas sp. Root329 could unveil its potential benefits in sustainable agricultural practices or bioremediation efforts, emphasizing the importance of studying microbial diversity for ecological and agricultural advancements.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. Root329
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. Root329
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. Root329 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1365907 bp

Thymine Count

1386618 bp

Guanine Count

2008014 bp

Cytosine Count

1972593 bp

Genome Length

6733554 bp

Protein-coding Genes

5927 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
elongation factor gASC74_27740Not AvailableNegative4388939 - 439104477166.4
30s ribosomal protein s7ASC74_27745Not AvailableNegative4391075 - 439154517648.6
30s ribosomal protein s12ASC74_27750Not AvailableNegative4391664 - 439203513725.7
dna-directed rna polymerase subunit beta'ASC74_27755Not AvailableNegative4392252 - 4396451154594.0
dna-directed rna polymerase subunit betaASC74_27760Not AvailableNegative4396516 - 4400589150934.0
50s ribosomal protein l7/l12ASC74_27765Not AvailableNegative4400810 - 440117512475.1
50s ribosomal protein l10ASC74_27770Not AvailableNegative4401256 - 440175617600.4
50s ribosomal protein l1ASC74_27775Not AvailableNegative4401955 - 440265024083.3
50s ribosomal protein l11ASC74_27780Not AvailableNegative4402650 - 440308114913.1
antitermination protein nusgASC74_27785Not AvailableNegative4403199 - 440373220011.0

Displaying genes 3981 – 3990 of 6058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.