Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_20985 | Q84BZ4 | Positive | 1097824 - 1098849 | 37327.8 |
| regulator of ribonuclease activity | ASC78_20990 | Not Available | Negative | 1098821 - 1099399 | 19979.3 |
| 3-isopropylmalate dehydratase | ASC78_20995 | B8CX22 | Positive | 1099516 - 1101483 | 70382.8 |
| crp/fnr family transcriptional regulator | ASC78_21000 | Not Available | Positive | 1101473 - 1102225 | 28467.2 |
| lysr family transcriptional regulator | ASC78_21005 | P77559 | Positive | 1102274 - 1103161 | 32272.3 |
| abc transporter substrate-binding protein | ASC78_21010 | Not Available | Positive | 1103386 - 1104375 | 34345.7 |
| indolepyruvate ferredoxin oxidoreductase | ASC78_21015 | P80911 | Positive | 1104398 - 1107922 | 126794.0 |
| acetyl-coa acetyltransferase | ASC78_21020 | Q0KBP1 | Positive | 1107932 - 1109116 | 40892.3 |
| hypothetical protein | ASC78_21025 | B6IPN3 | Positive | 1109310 - 1109843 | 18574.3 |
| hypothetical protein | ASC78_21030 | Not Available | Positive | 1110047 - 1111003 | 34878.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
