Mycobacterium sp. Root265

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium sp. Root265 is a bacterium characterized by the presence of flagella, which are essential for motility and can play a role in its interaction with the environment. This species has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and efficiency in various ecological niches. The genomic sequence of Mycobacterium sp. Root265 is cataloged under the accession number LMJA00000000.1, providing a resource for further genetic and functional studies. The presence of flagella suggests that this bacterium may have specific ecological advantages, such as the ability to navigate toward favorable conditions or away from harmful environments. The traits of Mycobacterium sp. Root265 indicate that it may be well-suited for survival in dynamic ecosystems, where motility can enhance nutrient acquisition and colonization of specific habitats. Understanding the role of flagella and the implications of its single replicon can provide insights into the bacterium's ecological interactions and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium sp. Root265
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium sp. Root265 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1093583 bp

Thymine Count

1094731 bp

Guanine Count

2239680 bp

Cytosine Count

2243744 bp

Genome Length

6672097 bp

Protein-coding Genes

6169 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseASE48_26425Q82M83Negative1876101 - 187696129601.6
tetr family transcriptional regulatorASE48_26430Q88FX7Negative1877108 - 187775224561.3
4-hydroxyphenylpyruvate dioxygenaseASE48_26435Q88JU3Positive1877818 - 187956363444.9
3-dehydroquinate dehydrataseASE48_26440C9SU87Positive1879584 - 188002415466.3
hypothetical proteinASE48_26445Not AvailablePositive1880021 - 188040113292.8
gcn5 family acetyltransferaseASE48_26450P79081Negative1880398 - 188088317879.0
hypothetical proteinASE48_26455P9WFW8Negative1880880 - 188197137692.6
acid phosphataseASE48_26460Q6MWZ7Negative1881968 - 188258222301.5
chromosome partitioning proteinASE48_26465P9WLT0Positive1882697 - 188346426962.6
hypothetical proteinASE48_26470Not AvailableNegative1883469 - 188468642277.0

Displaying genes 1861 – 1870 of 6299 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

531 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da

Displaying 1–10 of 531 metabolites

Health Effects

No health effects information available for this bacterium.