Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. Root214 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835640 bp
Thymine Count
840677 bp
Guanine Count
1526546 bp
Cytosine Count
1521493 bp
Genome Length
4724829 bp
Protein-coding Genes
4281 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methanol dehydrogenase | ASE06_04590 | Not Available | Negative | 1001873 - 1002685 | 27599.7 |
| hypothetical protein | ASE06_04595 | Not Available | Negative | 1002714 - 1003310 | 21316.3 |
| hypothetical protein | ASE06_04600 | Not Available | Positive | 1003454 - 1003876 | 14650.2 |
| Tmrna,resume consensus sequence (at 214): aataggtgctaacgataa | Not Available | Not Available | Positive | 1003928 - 1004274 | Not Available |
| transcriptional regulator | ASE06_04605 | Not Available | Negative | 1004309 - 1004719 | 15320.0 |
| cation transporter | ASE06_04610 | Not Available | Positive | 1004788 - 1005411 | 21668.6 |
| sugar:proton symporter | ASE06_04615 | Not Available | Negative | 1005418 - 1006479 | 38255.1 |
| alpha-hydroxy-acid oxidizing enzyme | ASE06_04620 | Not Available | Negative | 1006501 - 1007643 | 40670.2 |
| carbohydrate kinase | ASE06_04625 | Not Available | Negative | 1007640 - 1009058 | 50624.5 |
| short-chain dehydrogenase | ASE06_04630 | Not Available | Positive | 1009174 - 1011288 | 75224.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
