Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. Root214 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835640 bp
Thymine Count
840677 bp
Guanine Count
1526546 bp
Cytosine Count
1521493 bp
Genome Length
4724829 bp
Protein-coding Genes
4281 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | ASE06_02500 | Not Available | Positive | 570394 - 570996 | 21934.2 |
| gcn5 family acetyltransferase | ASE06_02505 | Not Available | Positive | 570989 - 571528 | 19957.8 |
| hypothetical protein | ASE06_02510 | Not Available | Positive | 571531 - 571866 | 11951.9 |
| hypothetical protein | ASE06_02515 | Not Available | Positive | 572038 - 572412 | 13584.8 |
| pseudouridine synthase | ASE06_02520 | Not Available | Positive | 572444 - 573397 | 33456.2 |
| 30s ribosomal protein s15 | ASE06_02525 | Not Available | Positive | 573424 - 573693 | 10131.3 |
| polyribonucleotide nucleotidyltransferase | ASE06_02530 | Not Available | Positive | 573886 - 576210 | 83293.4 |
| dcmp deaminase | ASE06_02535 | Not Available | Negative | 576439 - 576900 | 16381.4 |
| atpase | ASE06_02540 | Not Available | Negative | 577010 - 577543 | 19777.5 |
| hypothetical protein | ASE06_02545 | Not Available | Negative | 577543 - 577923 | 13987.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
