Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. Root214 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835640 bp
Thymine Count
840677 bp
Guanine Count
1526546 bp
Cytosine Count
1521493 bp
Genome Length
4724829 bp
Protein-coding Genes
4281 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | ASE06_21160 | Not Available | Negative | 4546098 - 4547099 | 35474.9 |
| hypothetical protein | ASE06_21165 | Not Available | Negative | 4547157 - 4547570 | 14526.5 |
| histidine kinase | ASE06_21170 | Not Available | Positive | 4547720 - 4548952 | 44456.5 |
| cold-shock protein | ASE06_21175 | Not Available | Positive | 4549132 - 4549338 | 7423.69 |
| translation initiation factor if-1 | ASE06_21180 | Not Available | Positive | 4549343 - 4549606 | 9754.84 |
| hypothetical protein | ASE06_21185 | Not Available | Positive | 4549833 - 4550045 | 7614.81 |
| omega amino acid--pyruvate aminotransferase | ASE06_21190 | Not Available | Negative | 4550058 - 4551374 | 46810.1 |
| glutamine synthetase | ASE06_21195 | Not Available | Positive | 4551631 - 4552977 | 50033.7 |
| fad-dependent oxidoreductase | ASE06_21200 | Not Available | Positive | 4552992 - 4554260 | 45673.4 |
| aminotransferase | ASE06_21205 | Not Available | Positive | 4554257 - 4555600 | 47163.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
