Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. Root214 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835640 bp
Thymine Count
840677 bp
Guanine Count
1526546 bp
Cytosine Count
1521493 bp
Genome Length
4724829 bp
Protein-coding Genes
4281 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein tyrosine phosphatase | ASE06_20455 | Not Available | Positive | 4394132 - 4394911 | 28258.6 |
| xaa-pro dipeptidase | ASE06_20460 | Not Available | Negative | 4394915 - 4396249 | 47239.3 |
| hypothetical protein | ASE06_20465 | Not Available | Negative | 4396324 - 4396905 | 20741.4 |
| hypothetical protein | ASE06_20470 | Not Available | Negative | 4396941 - 4397537 | 21456.1 |
| dihydrolipoamide dehydrogenase | ASE06_20475 | Not Available | Negative | 4397559 - 4398956 | 49358.9 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | ASE06_20480 | Not Available | Negative | 4398958 - 4400265 | 44274.6 |
| universal stress protein | ASE06_20485 | Not Available | Positive | 4400439 - 4400894 | 15320.5 |
| hypothetical protein | ASE06_20490 | Not Available | Negative | 4400891 - 4401280 | 12881.3 |
| xre family transcriptional regulator | ASE06_20495 | Not Available | Positive | 4401398 - 4402180 | 28504.3 |
| ribonuclease r | ASE06_20500 | Not Available | Negative | 4402262 - 4404580 | 84743.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
