Hydrogenophaga sp. Root209

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Hydrogenophaga

Description

Hydrogenophaga sp. Root209 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, indicative of a streamlined genetic organization that is common in many bacterial species. The accession number associated with Hydrogenophaga sp. Root209 is LMIE00000000.1, which provides a reference point for genomic data and further research. As a member of the genus Hydrogenophaga, this bacterium is typically associated with environments where hydrogen and other reduced compounds are present, suggesting a role in biogeochemical cycles. The capacity to utilize hydrogen as an energy source may enhance its ecological significance, particularly in nutrient cycling and the degradation of organic materials in its environment. The streamlined nature of its genetic makeup, coupled with its metabolic capabilities, positions Hydrogenophaga sp. Root209 as a potential player in the microbial community dynamics, especially in habitats where hydrogen is abundant. This can have implications for understanding microbial interactions and energy flows in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusHydrogenophaga
SpeciesHydrogenophaga sp. Root209
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenophaga sp. Root209 contig_9, whole genome shotgun

Gene Summary

Adenine Count

935254 bp

Thymine Count

916376 bp

Guanine Count

1710494 bp

Cytosine Count

1744745 bp

Genome Length

5307743 bp

Protein-coding Genes

4851 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseASE11_20525Not AvailableNegative949092 - 94987428207.8
fumarylacetoacetate hydrolaseASE11_20530Not AvailableNegative949871 - 95052122957.8
marr family transcriptional regulatorASE11_20535Not AvailableNegative950518 - 95100018016.9
2-nitropropane dioxygenaseASE11_20540Not AvailablePositive951079 - 95213136370.6
hypothetical proteinASE11_20545Not AvailableNegative952115 - 95324541878.0
dna repair protein radaASE11_20550Not AvailablePositive953244 - 95462048291.4
glycerate kinaseASE11_20555Not AvailablePositive954683 - 95511715642.3
branched-chain amino acid aminotransferaseASE11_20560Not AvailablePositive955183 - 95613335176.2
hypothetical proteinASE11_20565Not AvailablePositive956139 - 9563457360.79
dtdp-glucose 4,6-dehydrataseASE11_20570Not AvailablePositive956448 - 95751839653.6

Displaying genes 911 – 920 of 4907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.