Hydrogenophaga sp. Root209

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Hydrogenophaga

Description

Hydrogenophaga sp. Root209 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, indicative of a streamlined genetic organization that is common in many bacterial species. The accession number associated with Hydrogenophaga sp. Root209 is LMIE00000000.1, which provides a reference point for genomic data and further research. As a member of the genus Hydrogenophaga, this bacterium is typically associated with environments where hydrogen and other reduced compounds are present, suggesting a role in biogeochemical cycles. The capacity to utilize hydrogen as an energy source may enhance its ecological significance, particularly in nutrient cycling and the degradation of organic materials in its environment. The streamlined nature of its genetic makeup, coupled with its metabolic capabilities, positions Hydrogenophaga sp. Root209 as a potential player in the microbial community dynamics, especially in habitats where hydrogen is abundant. This can have implications for understanding microbial interactions and energy flows in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusHydrogenophaga
SpeciesHydrogenophaga sp. Root209
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenophaga sp. Root209 contig_9, whole genome shotgun

Gene Summary

Adenine Count

935254 bp

Thymine Count

916376 bp

Guanine Count

1710494 bp

Cytosine Count

1744745 bp

Genome Length

5307743 bp

Protein-coding Genes

4851 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conjugal transfer protein trbcASE11_17630Not AvailablePositive5084624 - 508491410084.4
type vi secretion proteinASE11_17635Not AvailablePositive5084933 - 508526512766.1
type iv secretion system protein virb4ASE11_17640Not AvailablePositive5085249 - 508775993200.4
hypothetical proteinASE11_17645Not AvailablePositive5087756 - 508818414990.1
conjugal transfer protein trblASE11_17650Not AvailablePositive5088197 - 508923136072.6
type vi secretion proteinASE11_17655Not AvailablePositive5089257 - 508995225347.5
type iv secretion system protein virb8ASE11_17660Not AvailablePositive5089975 - 509074528633.2
type iv secretion system protein virb9ASE11_17665Not AvailablePositive5090742 - 509165632543.2
type iv secretion system protein virb10ASE11_17670Not AvailablePositive5091653 - 509298145726.2
type iv secretion system protein virb11ASE11_17675Not AvailablePositive5092978 - 509412041586.2

Displaying genes 4711 – 4720 of 4907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.