Hydrogenophaga sp. Root209

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Hydrogenophaga

Description

Hydrogenophaga sp. Root209 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, indicative of a streamlined genetic organization that is common in many bacterial species. The accession number associated with Hydrogenophaga sp. Root209 is LMIE00000000.1, which provides a reference point for genomic data and further research. As a member of the genus Hydrogenophaga, this bacterium is typically associated with environments where hydrogen and other reduced compounds are present, suggesting a role in biogeochemical cycles. The capacity to utilize hydrogen as an energy source may enhance its ecological significance, particularly in nutrient cycling and the degradation of organic materials in its environment. The streamlined nature of its genetic makeup, coupled with its metabolic capabilities, positions Hydrogenophaga sp. Root209 as a potential player in the microbial community dynamics, especially in habitats where hydrogen is abundant. This can have implications for understanding microbial interactions and energy flows in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusHydrogenophaga
SpeciesHydrogenophaga sp. Root209
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenophaga sp. Root209 contig_9, whole genome shotgun

Gene Summary

Adenine Count

935254 bp

Thymine Count

916376 bp

Guanine Count

1710494 bp

Cytosine Count

1744745 bp

Genome Length

5307743 bp

Protein-coding Genes

4851 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formamidopyrimidine-dna glycosylaseASE11_02830Not AvailableNegative1856815 - 185763029578.2
hypothetical proteinASE11_02835Not AvailablePositive1857722 - 185953665929.8
hypothetical proteinASE11_02840Not AvailablePositive1859533 - 186000616729.0
4-diphosphocytidyl-2c-methyl-d-erythritol kinaseASE11_02845Not AvailablePositive1860021 - 186091132054.6
Trna-glnNot AvailableNot AvailablePositive1861006 - 1861082Not Available
ribose-phosphate pyrophosphokinaseASE11_02855Not AvailablePositive1861183 - 186215735023.6
50s ribosomal protein l25ASE11_02860Not AvailablePositive1862258 - 186288723016.1
peptidyl-trna hydrolaseASE11_02865Not AvailablePositive1862979 - 186365023990.8
ferredoxinASE11_02870Not AvailableNegative1863587 - 186389811271.3
phosphopantetheine adenylyltransferaseASE11_02875Not AvailableNegative1863915 - 186443318722.7

Displaying genes 1731 – 1740 of 4907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.