Hydrogenophaga sp. Root209

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Hydrogenophaga

Description

Hydrogenophaga sp. Root209 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, indicative of a streamlined genetic organization that is common in many bacterial species. The accession number associated with Hydrogenophaga sp. Root209 is LMIE00000000.1, which provides a reference point for genomic data and further research. As a member of the genus Hydrogenophaga, this bacterium is typically associated with environments where hydrogen and other reduced compounds are present, suggesting a role in biogeochemical cycles. The capacity to utilize hydrogen as an energy source may enhance its ecological significance, particularly in nutrient cycling and the degradation of organic materials in its environment. The streamlined nature of its genetic makeup, coupled with its metabolic capabilities, positions Hydrogenophaga sp. Root209 as a potential player in the microbial community dynamics, especially in habitats where hydrogen is abundant. This can have implications for understanding microbial interactions and energy flows in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusHydrogenophaga
SpeciesHydrogenophaga sp. Root209
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenophaga sp. Root209 contig_9, whole genome shotgun

Gene Summary

Adenine Count

935254 bp

Thymine Count

916376 bp

Guanine Count

1710494 bp

Cytosine Count

1744745 bp

Genome Length

5307743 bp

Protein-coding Genes

4851 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integraseASE11_23765Not AvailableNegative1658883 - 165917911512.0
transposaseASE11_23770Not AvailablePositive1659435 - 166088354932.2
Trna-metNot AvailableNot AvailablePositive1661194 - 1661270Not Available
50s ribosomal protein l17ASE11_23780Not AvailableNegative1661288 - 166168314800.2
dna-directed rna polymerase subunit alphaASE11_23785Not AvailableNegative1661770 - 166275336000.2
30s ribosomal protein s4ASE11_23790Not AvailableNegative1662848 - 166347123352.1
30s ribosomal protein s11ASE11_23795Not AvailableNegative1663634 - 166403814123.9
30s ribosomal protein s13ASE11_23800Not AvailableNegative1664057 - 166442213716.9
translation initiation factor if-1ASE11_23805Not AvailableNegative1664600 - 16648188278.25
preprotein translocase subunit secyASE11_23810Not AvailableNegative1664827 - 166614647584.4

Displaying genes 1541 – 1550 of 4907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.