Kitasatospora sp. Root187

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Kitasatospora

Description

Kitasatospora sp. Root187 is characterized by having a single replicon, which indicates its genetic structure is organized around one main chromosome. This trait can influence its replication and stability, potentially affecting its adaptability to various environments. The accession number for this strain is LMHX00000000.1, which serves as a unique identifier for genetic and taxonomic studies, facilitating further research and comparison with other microbial species. Kitasatospora spp. are known for their role in producing secondary metabolites, including antibiotics and other bioactive compounds, which can have significant implications in medicine and agriculture. The ecological role of Kitasatospora sp. Root187 may be linked to its potential interactions with other microorganisms or plants in its environment, contributing to soil health and nutrient cycling. In summary, Kitasatospora sp. Root187 is distinguished by its single replicon and is cataloged under accession LMHX00000000.1. Its production of secondary metabolites may provide ecological benefits, highlighting the importance of this strain in microbial diversity and its potential applications in biotechnology and natural product discovery.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusKitasatospora
SpeciesKitasatospora sp. Root187
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Kitasatospora sp. Root187 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1068561 bp

Thymine Count

1066128 bp

Guanine Count

2647103 bp

Cytosine Count

2700351 bp

Genome Length

7494243 bp

Protein-coding Genes

6308 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dcmp deaminaseASE03_03345Not AvailablePositive4637262 - 463770815760.7
had family hydrolaseASE03_03350P77475Positive4637754 - 463840722590.3
pyridoxamine 5'-phosphate oxidaseASE03_03355B8NM62Negative4638444 - 463902521370.6
hypothetical proteinASE03_03360O13871Positive4639171 - 463998329288.1
dna mismatch repair protein muttASE03_03365Not AvailablePositive4640265 - 464066314702.7
protein phosphataseASE03_03370Not AvailablePositive4640984 - 464365995314.9
pas sensor proteinASE03_03375Not AvailablePositive4643939 - 464637186818.7
hypothetical proteinASE03_03380P9WGU4Positive4646549 - 464834262557.3
gtp-binding protein typaASE03_03385O07631Positive4648574 - 465044268411.5
peptide abc transporter substrate-binding proteinASE03_03390A1A968Positive4650854 - 465247658078.5

Displaying genes 3931 – 3940 of 6375 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

396 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 396 metabolites

Health Effects

No health effects information available for this bacterium.