Brevundimonas sp. Root1279

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Brevundimonas

Description

Brevundimonas sp. Root1279 is a rod-shaped bacterium characterized by a single replicon in its genetic structure, which is important for its replication and overall genomic stability. This organism is cataloged under the accession number LMEB00000000.1, providing a reference point for further research and comparative studies within the genus Brevundimonas. The rod shape of Brevundimonas sp. Root1279 suggests a potential adaptability to various environments, as this morphology is often associated with enhanced motility and surface adherence capabilities. These traits may facilitate its survival in diverse ecological niches, possibly contributing to its roles in soil and plant-associated environments. Understanding the characteristics of Brevundimonas sp. Root1279 can provide insights into its ecological functions, particularly in relation to its interactions with plant roots. Given that members of the Brevundimonas genus are often found in rhizospheric environments, this species may contribute to plant health through various mechanisms, such as nutrient cycling or promoting plant growth. The single replicon structure may also allow for a streamlined metabolic process, enhancing its efficiency in nutrient utilization. In summary, Brevundimonas sp. Root1279 exhibits traits that may support its ecological role in soil ecosystems, particularly in relation to plant interactions. Further research on its specific functions could unveil its potential applications in agriculture or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusBrevundimonas
SpeciesBrevundimonas sp. Root1279
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Brevundimonas sp. Root1279 contig_9, whole genome shotgun

Gene Summary

Adenine Count

531982 bp

Thymine Count

529024 bp

Guanine Count

1179782 bp

Cytosine Count

1184958 bp

Genome Length

3425771 bp

Protein-coding Genes

3216 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinASC65_08200Not AvailableNegative1702324 - 170354144558.4
tetr family transcriptional regulatorASC65_08205Not AvailableNegative1703628 - 170425723265.9
hypothetical proteinASC65_08210Not AvailableNegative1704254 - 170481119952.7
hypothetical proteinASC65_08215Not AvailableNegative1704898 - 170577032147.1
cysteine synthaseASC65_08220P0A535Negative1705902 - 170688233797.1
amino acid apc transporterASC65_08225P18275Positive1707129 - 170855650848.0
arginine deiminaseASC65_08230Q988I1Positive1708572 - 170981345741.7
histidine kinaseASC65_08235Not AvailablePositive1709969 - 1712890106137.0
asnc family transcriptional regulatorASC65_08240Not AvailableNegative1712905 - 171340218620.5
hypothetical proteinASC65_08245E1W9W8Positive1713472 - 171439531844.1

Displaying genes 1661 – 1670 of 3284 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

205 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da

Displaying 1–10 of 205 metabolites

Health Effects

No health effects information available for this bacterium.