Pelomonas sp. Root1217

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Roseateles

Description

Pelomonas sp. Root1217 is a Gram-negative, rod-shaped bacterium. It possesses a single replicon, indicating a streamlined genetic structure that is often characteristic of bacteria adapted to specific ecological niches. The accession number for this organism is LMDC00000000.1, which provides a unique identifier for genomic data and further research. The classification as Gram-negative suggests that Pelomonas sp. Root1217 has a thinner peptidoglycan layer in its cell wall, surrounded by an outer membrane containing lipopolysaccharides. This structural feature can influence the bacterium's interactions with its environment, including its susceptibility to antibiotics and its ability to form biofilms. Ecologically, the unique traits of Pelomonas sp. Root1217 may suggest a specialization to particular environments, potentially contributing to nutrient cycling or interactions with plant roots, given that many members of the Pelomonas genus are associated with soil. The presence of a single replicon may also indicate a tightly regulated genetic system, which can be advantageous for survival in variable environments. Understanding the specific traits of Pelomonas sp. Root1217 may provide insights into its ecological roles and interactions within microbial communities, particularly in soil ecosystems. Further research into its metabolic capabilities and ecological functions could enhance our knowledge of its contribution to soil health and plant growth.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusRoseateles
SpeciesPelomonas sp. Root1217
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelomonas sp. Root1217 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1086759 bp

Thymine Count

1080061 bp

Guanine Count

2239265 bp

Cytosine Count

2243224 bp

Genome Length

6649903 bp

Protein-coding Genes

5745 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinASC95_05905Not AvailableNegative1315045 - 131736984784.4
lipoprotein transmembraneASC95_05910Not AvailableNegative1317535 - 131812220862.5
hypothetical proteinASC95_05915Not AvailableNegative1318164 - 131972054362.2
division/cell wall cluster transcriptional repressor mrazASC95_05920Not AvailablePositive1320147 - 132057815715.1
ribosomal rna small subunit methyltransferase hASC95_05925Not AvailablePositive1320590 - 132154634484.0
hypothetical proteinASC95_05930Not AvailablePositive1321548 - 13218119453.53
cell division proteinASC95_05935Not AvailablePositive1321858 - 132364564317.1
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseASC95_05940Not AvailablePositive1323648 - 132511451477.3
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligaseASC95_05945Not AvailablePositive1325111 - 132649947851.8
phospho-n-acetylmuramoyl-pentapeptide- transferaseASC95_05950Not AvailablePositive1326489 - 132766743155.1

Displaying genes 1161 – 1170 of 5805 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.