Devosia sp. Root105

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Devosiaceae

Genus

Devosia

Description

Devosia sp. Root105 is a Gram-negative, rod-shaped bacterium characterized by its single replicon structure. This organism has been cataloged under the accession number LMCR00000000.1, which provides a reference for further genetic studies and comparisons within the Devosia genus. As a member of the Devosia genus, Devosia sp. Root105 is likely to exhibit traits typical of this group, such as adaptations to diverse environmental conditions, including soil and rhizosphere ecosystems. While specific metabolic capabilities and ecological roles of Devosia sp. Root105 are not detailed in the provided traits, the genus is often associated with plant growth promotion and bioremediation processes. The presence of a single replicon in its genetic makeup may suggest a streamlined genomic organization, which can be advantageous for efficiency in replication and adaptation to environmental changes. This trait could have implications for its survival and function in the ecological niches it occupies. In summary, Devosia sp. Root105 exemplifies the characteristics of Gram-negative, rod-shaped bacteria with potential relevance in environmental microbiology and plant interactions. Further research could elucidate its specific ecological roles and applications in promoting plant health or bioremediation efforts, contributing to our understanding of beneficial microbial communities in the rhizosphere.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyDevosiaceae
GenusDevosia
SpeciesDevosia sp. Root105
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Devosia sp. Root105


Gene Summary

Adenine Count

1013874 bp

Thymine Count

1012057 bp

Guanine Count

1908896 bp

Cytosine Count

1915253 bp

Genome Length

5850260 bp

Protein-coding Genes

5479 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinASC68_13760Not AvailableNegative3519223 - 351963614348.1
Head morphogenesis proteinASC68_13765Not AvailableNegative3519633 - 352068238575.4
hypothetical proteinASC68_13770Not AvailablePositive3520885 - 352136117068.4
hypothetical proteinASC68_13775Not AvailableNegative3521358 - 352176213780.3
hypothetical proteinASC68_13780Not AvailableNegative3521755 - 352219815400.2
hypothetical proteinASC68_13785Not AvailableNegative3522201 - 35224649686.55
Coat proteinASC68_13790Not AvailableNegative3522536 - 352358538379.5
Putative capsid decoration proteinASC68_13795Not AvailableNegative3523598 - 352405915998.9
Hypothetical proteinASC68_13800Not AvailableNegative3524064 - 352520640668.4
hypothetical proteinASC68_13805Not AvailablePositive3525248 - 35254577779.24

Displaying genes 1 – 10 of 168 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

10 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000841L-arabinono-1,4-lactoneC5H8O5Chemical structure of L-arabinono-1,4-lactoneNot available
Average148.114Da
Monoisotopic148.037173358Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm00022461-dehydro-L-sorboseC6H10O6Chemical structure of 1-dehydro-L-sorboseNot available
Average178.14Da
Monoisotopic178.047738Da
BASm0002909O-acetyl-L-homoserineC6H11NO4Chemical structure of O-acetyl-L-homoserine7540-67-2
Average161.1558Da
Monoisotopic161.0688078Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003432di-trans,octa-cis-undecaprenyl diphosphateC55H89O7P2Chemical structure of di-trans,octa-cis-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.609999942Da
BASm0003463sn-glycero-3-phospho-1D-myo-inositolC9H18O11PChemical structure of sn-glycero-3-phospho-1D-myo-inositolNot available
Average333.206Da
Monoisotopic333.059222Da
BASm0003983di-trans,octa-cis-undecaprenyl phosphateC55H89O4PChemical structure of di-trans,octa-cis-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da
BASm0005086D-galactosamine 6-phosphateC6H14NO8PChemical structure of D-galactosamine 6-phosphate3616-42-0
Average259.151Da
Monoisotopic259.0457029Da

Displaying 1–10 of 10 metabolites

Health Effects

No health effects information available for this bacterium.