Nocardioides sp. Soil805

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides sp. Soil805 is a bacterial isolate characterized by a single replicon, indicating a streamlined genetic structure. The organism is cataloged under the accession LMSU00000000.1, which serves as a reference for its genomic data. This specific accession allows researchers to access the genetic information and study the organism's traits and potential applications. Nocardioides species are known for their role in soil ecosystems, often contributing to the degradation of complex organic compounds. This ability is significant, as it suggests that Nocardioides sp. Soil805 may play a role in nutrient cycling and soil health. The presence of Nocardioides in soil samples can indicate a diverse microbial community that is essential for maintaining ecological balance. In summary, Nocardioides sp. Soil805, with its single replicon and specific genomic accession, exemplifies the importance of microbial diversity in soil environments. Understanding its genetic makeup may provide insights into its ecological functions and potential applications in bioremediation or soil management practices.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides sp. Soil805
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides sp. Soil805 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

613359 bp

Thymine Count

612127 bp

Guanine Count

1596586 bp

Cytosine Count

1585586 bp

Genome Length

4407722 bp

Protein-coding Genes

4086 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
proteasome atpaseASG94_17830Not AvailablePositive3715431 - 371718564886.5
hypothetical proteinASG94_17835Not AvailablePositive3717182 - 371753812598.2
pup deamidase/depupylaseASG94_17840Not AvailablePositive3717784 - 371929556457.9
abc transporter substrate-binding proteinASG94_17845Not AvailableNegative3719323 - 372003324298.8
ubiquitinASG94_17850Not AvailablePositive3720092 - 37202897357.28
proteasome subunit betaASG94_17855Not AvailablePositive3720339 - 372116929014.4
pup--protein ligaseASG94_17865Not AvailablePositive3722265 - 372362651768.9
hypothetical proteinASG94_17870Not AvailablePositive3723716 - 372467233149.6
transcriptional regulatorASG94_17875Not AvailablePositive3724747 - 372573936653.1
hypothetical proteinASG94_17880Not AvailablePositive3725736 - 372674336520.9

Displaying genes 3491 – 3500 of 4136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.