Nocardioides sp. Soil805

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides sp. Soil805 is a bacterial isolate characterized by a single replicon, indicating a streamlined genetic structure. The organism is cataloged under the accession LMSU00000000.1, which serves as a reference for its genomic data. This specific accession allows researchers to access the genetic information and study the organism's traits and potential applications. Nocardioides species are known for their role in soil ecosystems, often contributing to the degradation of complex organic compounds. This ability is significant, as it suggests that Nocardioides sp. Soil805 may play a role in nutrient cycling and soil health. The presence of Nocardioides in soil samples can indicate a diverse microbial community that is essential for maintaining ecological balance. In summary, Nocardioides sp. Soil805, with its single replicon and specific genomic accession, exemplifies the importance of microbial diversity in soil environments. Understanding its genetic makeup may provide insights into its ecological functions and potential applications in bioremediation or soil management practices.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides sp. Soil805
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides sp. Soil805 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

613359 bp

Thymine Count

612127 bp

Guanine Count

1596586 bp

Cytosine Count

1585586 bp

Genome Length

4407722 bp

Protein-coding Genes

4086 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent succinate-semialdehyde dehydrogenaseASG94_07945Not AvailableNegative1609083 - 161056452668.1
hypothetical proteinASG94_07950Not AvailableNegative1610561 - 161123823163.5
acetoin dehydrogenaseASG94_07955Not AvailableNegative1611235 - 161221234715.9
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaASG94_07960Not AvailableNegative1612200 - 161321636248.8
aminopeptidaseASG94_07965Not AvailableNegative1613269 - 161460649003.2
zinc-binding dehydrogenaseASG94_07970Not AvailableNegative1614680 - 161575336987.4
abc transporterASG94_07975Not AvailableNegative1615774 - 161827587614.8
ribose abc transporter substrate-binding proteinASG94_07980Not AvailableNegative1618361 - 161941336643.6
abc transporter permeaseASG94_07985Not AvailableNegative1619542 - 162057934600.0
hypothetical proteinASG94_07990Not AvailableNegative1620725 - 162161529827.0

Displaying genes 1551 – 1560 of 4136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.