Nocardioides sp. Soil774

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides sp. Soil774 is a bacterial strain characterized by a single replicon, indicating a streamlined genetic organization. The strain has been cataloged under the accession number LMSM00000000.1, which allows for its identification and retrieval from genomic databases. Nocardioides species are known for their role in soil ecosystems, particularly in the degradation of organic materials and the cycling of nutrients. These bacteria contribute to soil health by breaking down complex organic compounds, thus facilitating nutrient availability for plants and other microorganisms. In ecological terms, Nocardioides sp. Soil774 may play a significant role in soil microbiomes, promoting a balanced ecosystem through its metabolic activities. The presence of such bacteria is crucial for maintaining soil fertility and supporting plant growth, which is essential for agricultural productivity and sustainability. Overall, the traits of Nocardioides sp. Soil774 underscore its potential importance in soil biology and ecology, particularly regarding its contributions to organic matter decomposition and nutrient cycling.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides sp. Soil774
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides sp. Soil774 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

538852 bp

Thymine Count

535688 bp

Guanine Count

1382644 bp

Cytosine Count

1388647 bp

Genome Length

3845859 bp

Protein-coding Genes

3597 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gcn5 family acetyltransferaseASG76_09730Not AvailableNegative2162260 - 216311130853.7
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseASG76_09735Not AvailableNegative2163141 - 216428940360.6
zinc metalloproteaseASG76_09740Not AvailableNegative2164337 - 216568348412.0
1-deoxy-d-xylulose 5-phosphate reductoisomeraseASG76_09745Not AvailableNegative2165732 - 216681737990.1
hypothetical proteinASG76_09750Not AvailableNegative2166814 - 216741019821.2
serine/threonine protein kinaseASG76_09760Not AvailablePositive2169118 - 216995131487.2
rossmann fold nucleotide-binding proteinASG76_09765Not AvailablePositive2170024 - 217111239393.5
glycosyl transferaseASG76_09770Not AvailableNegative2171090 - 217221140398.7
23s rrna (adenine(2503)-c2)-methyltransferaseASG76_09775Not AvailableNegative2172410 - 217354341028.5
hypothetical proteinASG76_09780Not AvailableNegative2173590 - 217393712769.9

Displaying genes 2031 – 2040 of 3649 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.