Rhizobium sp. Leaf453

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. Leaf453 is characterized as a rod-shaped bacterium, which is a common morphological trait among members of the Rhizobium genus. This species possesses flagella, indicating that it is motile, which may facilitate its movement in soil environments. The presence of flagella can be particularly advantageous for navigating through soil and reaching host plant roots for symbiotic relationships. The genome of Rhizobium sp. Leaf453 consists of a single replicon, which suggests a streamlined genetic architecture that may contribute to its adaptability and efficiency in nutrient acquisition and symbiotic interactions. The accession number for this bacterium is LMRG00000000.1, which provides a reference for genomic data and further study. Ecologically, Rhizobium species are well-known for their ability to form symbiotic relationships with leguminous plants, wherein they fix atmospheric nitrogen into a form that plants can utilize. This ability not only benefits the host plants by enhancing their nitrogen supply but also contributes to soil fertility and ecosystem health. The characteristics of Rhizobium sp. Leaf453 position it within this important ecological role, suggesting that it may play a part in promoting plant growth and contributing to nitrogen cycling in its environment. Understanding such traits can help in exploring the potential applications of Rhizobium sp. Leaf453 in sustainable agriculture and soil management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. Leaf453
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. Leaf453
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. Leaf453 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1264414 bp

Thymine Count

1274088 bp

Guanine Count

1918821 bp

Cytosine Count

1910419 bp

Genome Length

6368454 bp

Protein-coding Genes

5813 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter atp-binding proteinASG68_29465Q92MP8Negative3630941 - 363252455377.1
dehydrogenaseASG68_29470Not AvailableNegative3632548 - 363372042497.7
sugar abc transporter substrate-binding proteinASG68_29475Not AvailableNegative3633836 - 363495738599.1
sugar phosphate isomeraseASG68_29480Q0TUZ0Negative3635040 - 363585229218.4
rok family transcriptional regulatorASG68_29485Q44406Positive3636111 - 363746047143.1
sugar abc transporter substrate-binding proteinASG68_29490Not AvailablePositive3637501 - 363852036217.8
restriction endonucleaseASG68_29495O06715Positive3638887 - 363921612428.8
hypothetical proteinASG68_29500Not AvailableNegative3639241 - 36394628075.01
hypothetical proteinASG68_29505Not AvailableNegative3639481 - 363975610434.3
hypothetical proteinASG68_29515Not AvailableNegative3640260 - 36404818175.68

Displaying genes 3421 – 3430 of 5891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

359 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–10 of 359 metabolites

Health Effects

No health effects information available for this bacterium.