Williamsia sp. Leaf354

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Williamsia

Description

Williamsia sp. Leaf354 is a Gram-positive bacterium characterized by its single replicon. The organism is cataloged under the accession number LMPL00000000.1, which is associated with its genomic data. Gram-positive bacteria, like Williamsia sp. Leaf354, are typically recognized for their thick peptidoglycan cell wall, which can influence their susceptibility to antibiotics and their overall cellular structure. This trait may also impact their ecological roles, particularly in nutrient cycling and interactions with other microorganisms. The presence of a single replicon indicates a streamlined genomic structure, which can be advantageous for adaptation and survival in specific environments. This trait may suggest a level of specialization that allows Williamsia sp. Leaf354 to thrive in its native habitat, potentially contributing to its ecological niche. In summary, the traits of Williamsia sp. Leaf354 highlight its classification as a Gram-positive bacterium with a singular replicon, suggesting a potential for specialized ecological functions. Further studies could elucidate its role in microbial communities and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusWilliamsia
SpeciesWilliamsia sp. Leaf354
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Williamsia sp. Leaf354 contig_5, whole genome shotgun sequence.

Gene Summary

Adenine Count

708584 bp

Thymine Count

710653 bp

Guanine Count

1578042 bp

Cytosine Count

1569361 bp

Genome Length

4566645 bp

Protein-coding Genes

4064 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinASG12_00420Not AvailableNegative94020 - 9453819324.4
hypothetical proteinASG12_00425Not AvailableNegative94540 - 9547533729.3
hypothetical proteinASG12_00430Not AvailableNegative95853 - 9663528617.1
cytidine deaminaseASG12_00435O59834Positive96616 - 9714318460.9
rna polymerase subunit sigma-70ASG12_00440P9WGG4Positive97183 - 9822038126.0
glyoxalaseASG12_00445Not AvailableNegative98237 - 9864714837.3
hypothetical proteinASG12_00450Not AvailablePositive98756 - 10004845774.7
luxr family transcriptional regulatorASG12_00455P0AF30Positive100107 - 10070620771.0
hypothetical proteinASG12_00460Not AvailablePositive100792 - 10135218805.3
xre family transcriptional regulatorASG12_00465Not AvailableNegative101414 - 10174611704.1

Displaying genes 81 – 90 of 4114 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

399 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da

Displaying 1–10 of 399 metabolites

Health Effects

No health effects information available for this bacterium.