Allobosea sp. Leaf344

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Alloboseaceae

Genus

Allobosea

Description

Allobosea sp. Leaf344 is characterized as a Gram-negative bacterium with a rod-shaped morphology. The classification as Gram-negative indicates that it possesses a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which can influence its interactions with the environment and other organisms. This particular strain is noted to have a single replicon, which suggests that it may have a streamlined genetic organization that could facilitate efficient replication under certain conditions. The accession number for Allobosea sp. Leaf344 is LMRT00000000.1, which allows for its identification and retrieval from biological databases for further research. In terms of ecological significance, the traits associated with Allobosea sp. Leaf344 may imply its adaptability to various environments, particularly those that favor Gram-negative bacteria. This adaptability can play a vital role in nutrient cycling and interactions within microbial communities. Understanding the specific ecological roles of such microorganisms can provide insights into their contributions to ecosystem functions and the maintenance of biodiversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAlloboseaceae
GenusAllobosea
SpeciesAllobosea sp. Leaf344
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bosea sp. Leaf344 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

688797 bp

Thymine Count

694250 bp

Guanine Count

1486786 bp

Cytosine Count

1476627 bp

Genome Length

4350923 bp

Protein-coding Genes

3870 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginine transporterASG72_17025P37895Negative3793504 - 379450235089.5
hypothetical proteinASG72_17030Not AvailablePositive3794574 - 379577343122.1
hypothetical proteinASG72_17035Not AvailablePositive3795860 - 379687035951.9
hypothetical proteinASG72_17040Not AvailablePositive3796917 - 379781332309.6
asnc family transcriptional regulatorASG72_17045Q9I1M3Negative3797841 - 379829917110.7
methionine gamma-lyaseASG72_17050Q8RDT4Positive3798466 - 379974946275.4
hypothetical proteinASG72_17055Not AvailableNegative3799858 - 380059527004.5
spermidine/putrescine abc transporter substrate-binding proteinASG72_17060Q02UB7Positive3800818 - 380188539408.4
abc transporter atp-binding proteinASG72_17065P31134Positive3801882 - 380307544006.6
putrescine/spermidine abc transporter permeaseASG72_17070P31135Positive3803072 - 380398032457.7

Displaying genes 3411 – 3420 of 3926 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

309 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 309 metabolites

Health Effects

No health effects information available for this bacterium.