Allobosea sp. Leaf344

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Alloboseaceae

Genus

Allobosea

Description

Allobosea sp. Leaf344 is characterized as a Gram-negative bacterium with a rod-shaped morphology. The classification as Gram-negative indicates that it possesses a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which can influence its interactions with the environment and other organisms. This particular strain is noted to have a single replicon, which suggests that it may have a streamlined genetic organization that could facilitate efficient replication under certain conditions. The accession number for Allobosea sp. Leaf344 is LMRT00000000.1, which allows for its identification and retrieval from biological databases for further research. In terms of ecological significance, the traits associated with Allobosea sp. Leaf344 may imply its adaptability to various environments, particularly those that favor Gram-negative bacteria. This adaptability can play a vital role in nutrient cycling and interactions within microbial communities. Understanding the specific ecological roles of such microorganisms can provide insights into their contributions to ecosystem functions and the maintenance of biodiversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAlloboseaceae
GenusAllobosea
SpeciesAllobosea sp. Leaf344
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bosea sp. Leaf344 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

688797 bp

Thymine Count

694250 bp

Guanine Count

1486786 bp

Cytosine Count

1476627 bp

Genome Length

4350923 bp

Protein-coding Genes

3870 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell division protein mrazASG72_10170B2IGF1Positive2333865 - 233433817142.4
ribosomal rna small subunit methyltransferase hASG72_10175A9VW37Positive2334335 - 233537537054.5
hypothetical proteinASG72_10180Not AvailablePositive2335378 - 233576714335.4
penicillin-binding proteinASG72_10185B8H0A0Positive2335764 - 233753363474.0
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseASG72_10190Q89FU2Positive2337595 - 233904349728.7
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligaseASG72_10195Q9AKP1Positive2339040 - 234046448975.4
phospho-n-acetylmuramoyl-pentapeptide- transferaseASG72_10200A7IGE9Positive2340586 - 234166838339.9
udp-n-acetylmuramoylalanine--d-glutamate ligaseASG72_10205Q98KB1Positive2341673 - 234310349737.4
hypothetical proteinASG72_10210P44586Positive2343313 - 234547878584.5
hypothetical proteinASG72_10215Not AvailableNegative2345756 - 234606110801.0

Displaying genes 2081 – 2090 of 3926 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

309 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 309 metabolites

Health Effects

No health effects information available for this bacterium.