Sphingomonas sp. Leaf343

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. Leaf343 is characterized as a rod-shaped bacterium, a morphological trait that is common among various members of the Sphingomonadaceae family. This organism possesses flagella, which suggests the capability for motility, allowing it to navigate its environment effectively. Genomic analysis reveals that Sphingomonas sp. Leaf343 has a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation to its ecological niche. The strain is cataloged under the accession number LMPG00000000.1, which provides a reference for its genomic data within biological databases. The presence of flagella in Sphingomonas sp. Leaf343 may play a significant role in its ecological interactions, particularly in soil and plant environments where it has been isolated. This motility can enhance its ability to colonize surfaces and access nutrients, potentially contributing to its role in biogeochemical cycling. Understanding the motility and genetic characteristics of this bacterium could shed light on its ecological functions, such as its interactions with plant systems and its potential applications in bioremediation or phytoremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. Leaf343
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. Leaf343
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. Leaf343 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

591702 bp

Thymine Count

592426 bp

Guanine Count

1206102 bp

Cytosine Count

1209769 bp

Genome Length

3600029 bp

Protein-coding Genes

3242 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rrf2 family transcriptional regulatorASG07_01820Not AvailableNegative432652 - 43308315614.2
Tmrna,resume consensus sequence (at 225): cacaagtgccaacgataaNot AvailableNot AvailablePositive433172 - 433529Not Available
hypothetical proteinASG07_01825Not AvailableNegative433708 - 4339087138.95
polyribonucleotide nucleotidyltransferaseASG07_01830Not AvailableNegative434314 - 43670785480.0
30s ribosomal protein s15ASG07_01835Not AvailableNegative436866 - 43713510416.7
pseudouridine synthaseASG07_01840Not AvailableNegative437132 - 43814234939.0
hypothetical proteinASG07_01845Not AvailableNegative438176 - 43854113315.0
thymidine kinaseASG07_01850Not AvailableNegative438567 - 43916621757.9
hypothetical proteinASG07_01855Not AvailableNegative439168 - 43956014458.3
hypothetical proteinASG07_01860Not AvailableNegative439557 - 43983810375.4

Displaying genes 361 – 370 of 3295 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.