Sphingomonas sp. Leaf343

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. Leaf343 is characterized as a rod-shaped bacterium, a morphological trait that is common among various members of the Sphingomonadaceae family. This organism possesses flagella, which suggests the capability for motility, allowing it to navigate its environment effectively. Genomic analysis reveals that Sphingomonas sp. Leaf343 has a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation to its ecological niche. The strain is cataloged under the accession number LMPG00000000.1, which provides a reference for its genomic data within biological databases. The presence of flagella in Sphingomonas sp. Leaf343 may play a significant role in its ecological interactions, particularly in soil and plant environments where it has been isolated. This motility can enhance its ability to colonize surfaces and access nutrients, potentially contributing to its role in biogeochemical cycling. Understanding the motility and genetic characteristics of this bacterium could shed light on its ecological functions, such as its interactions with plant systems and its potential applications in bioremediation or phytoremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. Leaf343
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. Leaf343
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. Leaf343 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

591702 bp

Thymine Count

592426 bp

Guanine Count

1206102 bp

Cytosine Count

1209769 bp

Genome Length

3600029 bp

Protein-coding Genes

3242 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinASG07_14130Not AvailablePositive3202708 - 320550399972.1
polysaccharide deacetylaseASG07_14135Not AvailablePositive3205638 - 320658534248.6
dna repair protein recoASG07_14145Not AvailablePositive3207546 - 320827725820.2
3-isopropylmalate dehydrogenaseASG07_14150Not AvailablePositive3208322 - 320936536631.1
dolichol monophosphate mannose synthaseASG07_14155Not AvailablePositive3209379 - 321047939889.8
dolichyl-phosphate-mannose-protein mannosyltransferaseASG07_14160Not AvailableNegative3210504 - 321175146559.4
o-succinylhomoserine sulfhydrylaseASG07_14165Not AvailablePositive3211819 - 321302743330.8
co2+/mg2+ efflux protein apagASG07_14170Not AvailablePositive3213039 - 321343714437.0
lysr family transcriptional regulatorASG07_14175Not AvailablePositive3213505 - 321429627709.2
gcn5 family acetyltransferaseASG07_14180Not AvailablePositive3214293 - 321482320208.1

Displaying genes 2951 – 2960 of 3295 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.